ksak: a high-throughput tool for alignment-free phylogenetics

HIGHLIGHTS

  • who: ufeffXuemeiufeff ufeffLiuufeff and collaborators from the of Arkansas for Medical Sciences, United States have published the paper: ufeffKsakufeff: A high-throughput tool for alignment-free phylogenetics, in the Journal: (JOURNAL)
  • how: The authors developed Ksak - a tool that not only efficiently computes seven widely accepted k-mer statistics Chebyshev (Ch) Manhattan (Ma) Euclidian (Eu) Hao (Qi et_al 2004) d2 d2S and d2star (Song et_al 2013) but also performs alignment-free phylogenetic analysis. Given the fact that the most useful k for alignmentfree phylogenetics is relatively small typically and amplt10 the authors implemented a neat . . .

     

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