Snprune: an efficient algorithm to prune large snp array and sequence datasets based on high linkage disequilibrium

HIGHLIGHTS

• who: Mario P. L. Calus from the (UNIVERSITY) have published the article: SNPrune: an efficient algorithm to prune large SNP array and sequence datasets based on high linkage disequilibrium, in the Journal: (JOURNAL)
• what: The aims of the study were to develop an algorithm to be able to detect quickly any pair of SNPs in complete or very high LD in very large datasets, using the assumption that highly correlated SNPs should have similar MAF, and_(2) to demonstrate the performance of this algorithm. After identifying pairs of SNPs based on sums across all individuals . . .
  

   

  

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