Globally distributed root endophyte phialocephala subalpina links pathogenic and saprophytic lifestyles

HIGHLIGHTS

• who: Markus Schlegel from the A whole genome shotgun strategy (WGS) on the Roche/ , GS FLX (454) was used and sequencing was performed at the Functional Genomic Centre of University Zürich/ETH Zürich (FGCZ)In total, ., Mio shotgun reads as well as, ., Mio reads from one , kb paired-end library, ., Mio reads of three , kb paired-end libraries and, reads of a , kb library were included in the assembly. The assembly was performed using newbler, ., with a minimum overlap of , bases and, % sequence similarity. We noticed that newbler tends to open gaps due to the . . .
  

   

  

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