Substrate prediction of ixodes ricinus salivary lipocalins differentially expressed during borrelia afzelii infection

HIGHLIGHTS

• who: James J. Valdu00e9s from the InstitutUniversity of have published the article: Substrate prediction of Ixodes ricinus salivary lipocalins differentially expressed during Borrelia afzelii infection, in the Journal: Scientific Reports Scientific Reports
• how: For the tick tree the authors used 1748 tick lipocalin sequences available in GenBank.

SUMMARY

To obtain a reliable lipocalin alignment (as defined using GUIDANCE), three alignments were produced using the PAGAN, MAFFT, and CLUSTALW algorithms. At the H site, the omega-loop of JAA70189 has the conserved Asp38 that forms contact with the amine group of histamine . . .

 



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