Xcvatr: detection and characterization of variant impact on the embeddings of single -cell and bulk rna-sequencing samples

HIGHLIGHTS

  • who: Arif Harmanci from the University of Texas Health Science Center, School of Biomedical Informatics, for Precision Health, Houston, USA have published the research work: XCVATR: detection and characterization of variant impact on the Embeddings of single -cell and bulk RNA-sequencing samples, in the Journal: (JOURNAL)
  • what: Through simulations and analysis of real datasets the authors demonstrate that can detect enrichment of expressed variants and provide insight into the transcriptional states of cells and samples. The authors propose a novel method for the detection, integration, and visualization of genetic variation within the embedding space . . .

     

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