Extending and using anatomical vocabularies in the stimulating peripheral activity to relieve conditions project

HIGHLIGHTS

SUMMARY

    In support of FAIR principles, the overall strategy for the SPARC vocabulary is to utilize anatomical ontologies already in use by the community (Noy and Mc Guinness, 2001; Wilkinson et_al, 2016). The SPARC vocabulary utilizes UBERON (Haendel et_al, 2009; Mungall et_al, 2012), the multi-species anatomy ontology, as the backbone of anatomical terminology efforts supplemented, as necessary, with additional species-specific ontologies such as Foundational Model of Anatomy (Nichols et_al, 2014) and EMAPA (Hayamizu et_al, 2013). We, therefore, established a term submission pipeline using infrastructure initially developed by the Neuroscience Information Framework (Imam et_al . . .

     

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