A comparison of five illumina, ion torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of sars-cov-2

HIGHLIGHTS

• who: Ellen C. Carbo from the Sample selection In total, SARS-Co, PCR-positive samples of , patients were selected: nine tracheal aspirates, nasopharyngeal/throat swabs, and one lung lymph node biopsyFifteen of these samples were obtained for cluster identification. Samples were retrospectively included to be tested with five WGS protocols. Samples were previously sent to the Clinical Microbiological Laboratory of the Leiden University Medical Center (LUMC, The Netherlands) for nucleotide extraction and SARS-Co, gene PCR testing [23] in the period March-October , (Wuhan-like viruses circulating). After nucleotide extraction and PCR, samples were stored at , u00b0 . . .
  

   

  

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