A complete theoretical framework for inferring horizontal gene transfers using partial order sets

HIGHLIGHTS

SUMMARY

    Given a poset for each gene, a tree corresponding to that gene is constructed; different trees suggest genes that are candidates for HGT. Given the tree shown in Figs 6, 7 shows an example of a poset that is compatible with the given tree, while Fig 8 shows an incompatible poset, where the poset indicates that s3 is the closest species to s1, while, in the tree, the closest species to s1 is s2. An example to show the minimum common refinement, given two S-trees, T1 and T2, if using a number of . . .

     

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