HIGHLIGHTS
SUMMARY
Arabidopsis thaliana, Billbergia nutans, and Carex lurida) that were included in the probe set design by Buddenhagen et_al, 2016. For this, the authors first estimated phylogenetic trees for each locus with maximum_likelihood in RAxML v.8.2.12 (Stamatakis, 2014), setting GTR+G as the substitution model, 100 tree searches, and 1,000 bootstrap replicates. Phylogenetic Discordance Source To explicitly evaluate the extent to which reticulation and ILS are causing phylogenetic discordance the authors used QuIBL (Quantifying Introgression via Branch Lengths; Edelman et_al, 2019). One of them is the usual violation of the molecular . . .
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