Chicmaxima: a robust and simple pipeline for detection and visualization of chromatin looping in capture hi-c

HIGHLIGHTS

  • who: Yousra Ben Zouari from the (UNIVERSITY) have published the research work: ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C, in the Journal: (JOURNAL)
  • what: With this approach, only three parameters need to be controlled: the span of the loess smoothing (s), the window size (w) for the local maximum computation, and the total genomic span (c, for cis-distance from bait) over which local maxima are assessed. The authors provide tools to allow the user to explore the distributions of closest distances between interactions called . . .

     

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