Comparative analysis of strategies for de novo transcriptome assembly in prokaryotes: streptomyces clavuligerus as a case study

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  • who: Carlos Caicedo-Montoya et al. from the Departamento IngenierĂ­a QuĂ­mica, Universidad Antioquia UdeA have published the paper: Comparative Analysis of Strategies for De Novo Transcriptome Assembly in Prokaryotes: Streptomyces clavuligerus as a Case Study, in the Journal: (JOURNAL)
  • what: The study focused on assessing the incidence of software parameters on software performance for the identification of differentially expressed genes as a final goal. This is the first work aimed at assessing novo assembly software for prokaryotic organisms. In this work, a parameter optimization of the assembler software Rockhopper2 was undertaken, and the . . .

     

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