Critical assessment of short-read assemblers for the metagenomic identification of foodborne and waterborne pathogens using simulated bacterial communities

HIGHLIGHTS

• who: Zhao Chen and Jianghong Meng from the Joint Institute for Food Safety and Applied Nutrition, University of Maryland, College Park, MD, USA have published the Article: Critical Assessment of Short-Read Assemblers for the Metagenomic Identification of Foodborne and Waterborne Pathogens Using Simulated Bacterial Communities, in the Journal: Microorganisms 2022, 2416 of /2022/
• what: The authors aimed to benchmark short-read assemblers for the metagenomic identification of foodborne and waterborne pathogens using simulated bacterial communities. The authors benchmarked six short-read assemblers designed for genomics or metagenomics using simulated bacterial communities on fresh spinach . . .
  

   

  

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