HIGHLIGHTS
- who: Tristan Cumer from the prepared according to manufacturer`s instructionsWhole-genome resequencing was performed on multiplexed libraries with Illumina HiSeq , high-throughput paired-end sequencing technologies at the Lausanne Genomic Technologies Facility (GTF, University of Lausanne, Switzerland). The bioinformatics pipeline used to obtain analysis-ready SNPs from the , individuals plus the outgroup was the same as in Machado et_al (2021), adapted from the Genome Analysis Toolkit (GATK) Best Practices (van der Auwera et_al, ) to a non-model organism following the developers` recommendations. Briefly, reads were trimmed with Trimommatic(Bolger et_al, ) and aligned with BWA-MEM(Li . . .
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