Improved analysis of (e)clip data with rcrunch yields a compendium of rna-binding protein binding sites and motifs

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• who: Maria Katsantoni from the University of Basel, Basel, Switzerland have published the Article: Improved analysis of (e)CLIP data with RCRUNCH yields a compendium of RNA-binding protein binding sites and motifs, in the Journal: (JOURNAL)
• what: This approach has the caveat that the size of the targeted protein varies from experiment to experiment and so will the proteins that are contained in the isolated band. Using data for proteins with well-characterized sequence specificity, the authors demonstrate that RCRUNCH enables the reproducible extraction of binding_sites, with higher enrichment in the expected motifs compared . . .
  

   

  

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