Mining novel cis-regulatory elements from the emergent host rhodosporidium toruloides using transcriptomic data

HIGHLIGHTS

• who: ufeffLuu00edsa Czamanskiufeff ufeffNoraufeff et al. from the University of Illinois at Urbana-Champaign, United States have published the paper: Mining novel ufeffcisufeff-regulatory elements from the emergent host ufeffRhodosporidium toruloidesufeff using transcriptomic data, in the Journal: (JOURNAL)
• how: The authors developed a bottom-up bioinformatic pipeline for cis-regulatory element discovery combining tools for motif prediction and sequence analysis. For pathway enrichment analysis the authors used the GAGE R package (Luo et_al 2009). The samples were sent for sequencing For each condition the authors selected the DEGs that belong to the KOG classes. The . . .
  

   

  

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