Spatialexperiment: infrastructure for spatially- resolved transcriptomics data in r using bioconductor

HIGHLIGHTS

  • who: Bioinformatics et al. from the Department of Statistical Sciences, University of Padova, Padova, Italy, Department of Biostatistics, Johns Hopkins Bloomberg have published the research: SpatialExperiment: infrastructure for spatially- resolved transcriptomics data in R using Bioconductor, in the Journal: (JOURNAL)
  • what: The authors demonstrate the structure and user interface with examples from the 10x Genomics Visium and seqFISH platforms and provide access to example datasets and visualization tools in the STexampleData TENxVisiumData and ggspavis packages. The authors provide the associated data packages STexampleData (example datasets from several platforms) and TENxVisiumData (publicly available Visium datasets provided . . .

     

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