Umgap: the unipept metagenomics analysis pipeline

HIGHLIGHTS

  • who: Felix Jeugt from the (UNIVERSITY) have published the research: UMGAP: the Unipept MetaGenomics Analysis Pipeline, in the Journal: (JOURNAL)
  • what: Because environmental samples may contain strains and species that are not covered in reference databases and because protein sequences are more conserved than the genes encoding them the authors explore the alternative route of taxonomic profiling based on protein coding regions translated from the shotgun metagenomics reads instead of directly processing the DNA reads. The authors explore the alternative route of first translating the protein coding regions in the reads of a shotgun metagenomics . . .

     

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